changes to reduce noise implemented

CovidAlertVaccinationModel/src/ABM/mixing_graphs.jl

@@ -82,9 +82,9 @@ Assumes the simulation begins on Thursday arbitrarily.
 function time_dep_mixing_graphs(len,base_network,demographics,index_vectors,ws_matrix_tuple,rest_matrix_tuple)
 
     #weekly multiply durations by 1/5
-    daily_shift(dur_dists) = dur_dists#shift_contact_distributions(dur_dists,1/5)
+    daily_shift(dur_dists) = shift_contact_distributions(dur_dists,1/5)
     #daily multiply by 1/2
-    weekly_shift(dur_dists) = dur_dists#shift_contact_distributions(dur_dists,1/2)
+    weekly_shift(dur_dists) = shift_contact_distributions(dur_dists,1/2)
 
     home_static_edges = WeightedGraph(base_network,demographics,contact_time_distributions.hh) #network with households and LTC homes
 
@@ -202,7 +202,7 @@ function remake!(wg::WeightedGraph,index_vectors)
     empty!.(wg.g.fadjlist) #empty all the vector edgelists
     wg.g.ne = 0
     empty!(wg.weights_dict)
-    assemble_graph!(wg.g,wg.weights_dict,index_vectors,wg.mixing_matrix,wg.sampler_matrix,wg.degrees_matrix; resample_degrees = true)
+    assemble_graph!(wg.g,wg.weights_dict,index_vectors,wg.mixing_matrix,wg.sampler_matrix,wg.degrees_matrix; resample_degrees = false)
 end
 
 

CovidAlertVaccinationModel/src/ABM/model_setup.jl

@@ -21,7 +21,7 @@
         κ = 0.0,
         ω = 0.0061,
         ω_en = 0.05,
-        Γ = 1/7,#0.906,
+        Γ = 0.906,
         ξ = 5.0,
         notification_parameter = 0.0005,
         vaccinator_prob = 0.6,