merge IntervalsModel into CovidAlertVaccinationModel, dependecies are too...

merge IntervalsModel into CovidAlertVaccinationModel, dependecies are too tight to manage as too packages easily

CovidAlertVaccinationModel/Manifest.toml

 # This file is machine-generated - editing it directly is not advised
 
+[[AbstractFFTs]]
+deps = ["LinearAlgebra"]
+git-tree-sha1 = "485ee0867925449198280d4af84bdb46a2a404d0"
+uuid = "621f4979-c628-5d54-868e-fcf4e3e8185c"
+version = "1.0.1"
+
+[[AbstractMCMC]]
+deps = ["BangBang", "ConsoleProgressMonitor", "Distributed", "Logging", "LoggingExtras", "ProgressLogging", "Random", "StatsBase", "TerminalLoggers", "Transducers"]
+git-tree-sha1 = "06e46b94299b6d0d9fb4f7833c7b1df3df6f9678"
+uuid = "80f14c24-f653-4e6a-9b94-39d6b0f70001"
+version = "3.0.0"
+
+[[AbstractTrees]]
+git-tree-sha1 = "03e0550477d86222521d254b741d470ba17ea0b5"
+uuid = "1520ce14-60c1-5f80-bbc7-55ef81b5835c"
+version = "0.3.4"
+
 [[Adapt]]
 deps = ["LinearAlgebra"]
-git-tree-sha1 = "ffcfa2d345aaee0ef3d8346a073d5dd03c983ebe"
+git-tree-sha1 = "f1b523983a58802c4695851926203b36e28f09db"
 uuid = "79e6a3ab-5dfb-504d-930d-738a2a938a0e"
-version = "3.2.0"
+version = "3.3.0"
 
 [[ArgCheck]]
 git-tree-sha1 = "dedbbb2ddb876f899585c4ec4433265e3017215a"
@@ -29,6 +46,12 @@ version = "3.1.7"
 [[Artifacts]]
 uuid = "56f22d72-fd6d-98f1-02f0-08ddc0907c33"
 
+[[AxisAlgorithms]]
+deps = ["LinearAlgebra", "Random", "SparseArrays", "WoodburyMatrices"]
+git-tree-sha1 = "a4d07a1c313392a77042855df46c5f534076fab9"
+uuid = "13072b0f-2c55-5437-9ae7-d433b7a33950"
+version = "1.0.0"
+
 [[BangBang]]
 deps = ["Compat", "ConstructionBase", "Future", "InitialValues", "LinearAlgebra", "Requires", "Setfield", "Tables", "ZygoteRules"]
 git-tree-sha1 = "d53b1eaefd48e233545d21f5b764c8ee54df4a09"
@@ -107,6 +130,18 @@ git-tree-sha1 = "f3955eb38944e5dd0fabf8ca1e267d94941d34a5"
 uuid = "a33af91c-f02d-484b-be07-31d278c5ca2b"
 version = "0.1.0"
 
+[[Conda]]
+deps = ["JSON", "VersionParsing"]
+git-tree-sha1 = "6231e40619c15148bcb80aa19d731e629877d762"
+uuid = "8f4d0f93-b110-5947-807f-2305c1781a2d"
+version = "1.5.1"
+
+[[ConsoleProgressMonitor]]
+deps = ["Logging", "ProgressMeter"]
+git-tree-sha1 = "3ab7b2136722890b9af903859afcf457fa3059e8"
+uuid = "88cd18e8-d9cc-4ea6-8889-5259c0d15c8b"
+version = "0.1.2"
+
 [[ConstructionBase]]
 deps = ["LinearAlgebra"]
 git-tree-sha1 = "48920211c95a6da1914a06c44ec94be70e84ffff"
@@ -146,6 +181,12 @@ git-tree-sha1 = "bfc1187b79289637fa0ef6d4436ebdfe6905cbd6"
 uuid = "e2d170a0-9d28-54be-80f0-106bbe20a464"
 version = "1.0.0"
 
+[[DataValues]]
+deps = ["DataValueInterfaces", "Dates"]
+git-tree-sha1 = "d88a19299eba280a6d062e135a43f00323ae70bf"
+uuid = "e7dc6d0d-1eca-5fa6-8ad6-5aecde8b7ea5"
+version = "0.4.13"
+
 [[Dates]]
 deps = ["Printf"]
 uuid = "ade2ca70-3891-5945-98fb-dc099432e06a"
@@ -169,6 +210,12 @@ git-tree-sha1 = "e64debe8cd174cc52d7dd617ebc5492c6f8b698c"
 uuid = "31c24e10-a181-5473-b8eb-7969acd0382f"
 version = "0.24.15"
 
+[[DocStringExtensions]]
+deps = ["LibGit2", "Markdown", "Pkg", "Test"]
+git-tree-sha1 = "9d4f64f79012636741cf01133158a54b24924c32"
+uuid = "ffbed154-4ef7-542d-bbb7-c09d3a79fcae"
+version = "0.8.4"
+
 [[Downloads]]
 deps = ["ArgTools", "LibCURL", "NetworkOptions"]
 uuid = "f43a241f-c20a-4ad4-852c-f6b1247861c6"
@@ -208,6 +255,18 @@ git-tree-sha1 = "3cc57ad0a213808473eafef4845a74766242e05f"
 uuid = "b22a6f82-2f65-5046-a5b2-351ab43fb4e5"
 version = "4.3.1+4"
 
+[[FFTW]]
+deps = ["AbstractFFTs", "FFTW_jll", "IntelOpenMP_jll", "Libdl", "LinearAlgebra", "MKL_jll", "Reexport"]
+git-tree-sha1 = "1b48dbde42f307e48685fa9213d8b9f8c0d87594"
+uuid = "7a1cc6ca-52ef-59f5-83cd-3a7055c09341"
+version = "1.3.2"
+
+[[FFTW_jll]]
+deps = ["Artifacts", "JLLWrappers", "Libdl", "Pkg"]
+git-tree-sha1 = "5a0d4b6a22a34d17d53543bd124f4b08ed78e8b0"
+uuid = "f5851436-0d7a-5f13-b9de-f02708fd171a"
+version = "3.3.9+7"
+
 [[FillArrays]]
 deps = ["LinearAlgebra", "Random", "SparseArrays"]
 git-tree-sha1 = "31939159aeb8ffad1d4d8ee44d07f8558273120a"
@@ -295,6 +354,18 @@ git-tree-sha1 = "c9f380c76d8aaa1fa7ea9cf97bddbc0d5b15adc2"
 uuid = "cd3eb016-35fb-5094-929b-558a96fad6f3"
 version = "0.9.5"
 
+[[Hwloc]]
+deps = ["Hwloc_jll"]
+git-tree-sha1 = "ffdcd4272a7cc36442007bca41aa07ca3cc5fda4"
+uuid = "0e44f5e4-bd66-52a0-8798-143a42290a1d"
+version = "1.3.0"
+
+[[Hwloc_jll]]
+deps = ["Artifacts", "JLLWrappers", "Libdl", "Pkg"]
+git-tree-sha1 = "aac91e34ef4c166e0857e3d6052a3467e5732ceb"
+uuid = "e33a78d0-f292-5ffc-b300-72abe9b543c8"
+version = "2.4.1+0"
+
 [[IfElse]]
 git-tree-sha1 = "28e837ff3e7a6c3cdb252ce49fb412c8eb3caeef"
 uuid = "615f187c-cbe4-4ef1-ba3b-2fcf58d6d173"
@@ -322,10 +393,22 @@ git-tree-sha1 = "26c8832afd63ac558b98a823265856670d898b6c"
 uuid = "22cec73e-a1b8-11e9-2c92-598750a2cf9c"
 version = "0.2.10"
 
+[[IntelOpenMP_jll]]
+deps = ["Artifacts", "JLLWrappers", "Libdl", "Pkg"]
+git-tree-sha1 = "d979e54b71da82f3a65b62553da4fc3d18c9004c"
+uuid = "1d5cc7b8-4909-519e-a0f8-d0f5ad9712d0"
+version = "2018.0.3+2"
+
 [[InteractiveUtils]]
 deps = ["Markdown"]
 uuid = "b77e0a4c-d291-57a0-90e8-8db25a27a240"
 
+[[Interpolations]]
+deps = ["AxisAlgorithms", "LinearAlgebra", "OffsetArrays", "Random", "Ratios", "SharedArrays", "SparseArrays", "StaticArrays", "WoodburyMatrices"]
+git-tree-sha1 = "eb1dd6d5b2275faaaa18533e0fc5f9171cec25fa"
+uuid = "a98d9a8b-a2ab-59e6-89dd-64a1c18fca59"
+version = "0.13.1"
+
 [[Intervals]]
 deps = ["Dates", "Printf", "RecipesBase", "Serialization", "TimeZones"]
 git-tree-sha1 = "323a38ed1952d30586d0fe03412cde9399d3618b"
@@ -365,6 +448,18 @@ git-tree-sha1 = "9aff0587d9603ea0de2c6f6300d9f9492bbefbd3"
 uuid = "aacddb02-875f-59d6-b918-886e6ef4fbf8"
 version = "2.0.1+3"
 
+[[KernelDensity]]
+deps = ["Distributions", "DocStringExtensions", "FFTW", "Interpolations", "StatsBase"]
+git-tree-sha1 = "09aeec87bdc9c1fa70d0b508dfa94a21acd280d9"
+uuid = "5ab0869b-81aa-558d-bb23-cbf5423bbe9b"
+version = "0.6.2"
+
+[[KissABC]]
+deps = ["AbstractMCMC", "Distributions", "MonteCarloMeasurements", "Random"]
+git-tree-sha1 = "693d4bd4cbb9ad6515414e0935bbd646b15fc16a"
+uuid = "9c9dad79-530a-4643-a18b-2704674d4108"
+version = "3.0.1"
+
 [[LAME_jll]]
 deps = ["Artifacts", "JLLWrappers", "Libdl", "Pkg"]
 git-tree-sha1 = "df381151e871f41ee86cee4f5f6fd598b8a68826"
@@ -394,6 +489,22 @@ git-tree-sha1 = "7c72983c6daf61393ee8a0b29a419c709a06cede"
 uuid = "23fbe1c1-3f47-55db-b15f-69d7ec21a316"
 version = "0.14.12"
 
+[[Lazy]]
+deps = ["MacroTools"]
+git-tree-sha1 = "1370f8202dac30758f3c345f9909b97f53d87d3f"
+uuid = "50d2b5c4-7a5e-59d5-8109-a42b560f39c0"
+version = "0.15.1"
+
+[[LazyArtifacts]]
+deps = ["Artifacts", "Pkg"]
+uuid = "4af54fe1-eca0-43a8-85a7-787d91b784e3"
+
+[[LeftChildRightSiblingTrees]]
+deps = ["AbstractTrees"]
+git-tree-sha1 = "71be1eb5ad19cb4f61fa8c73395c0338fd092ae0"
+uuid = "1d6d02ad-be62-4b6b-8a6d-2f90e265016e"
+version = "0.1.2"
+
 [[LibCURL]]
 deps = ["LibCURL_jll", "MozillaCACerts_jll"]
 uuid = "b27032c2-a3e7-50c8-80cd-2d36dbcbfd21"
@@ -480,6 +591,18 @@ uuid = "37e2e46d-f89d-539d-b4ee-838fcccc9c8e"
 [[Logging]]
 uuid = "56ddb016-857b-54e1-b83d-db4d58db5568"
 
+[[LoggingExtras]]
+deps = ["Dates", "Logging"]
+git-tree-sha1 = "59b45fd91b743dff047313bb7af0f84167aef80d"
+uuid = "e6f89c97-d47a-5376-807f-9c37f3926c36"
+version = "0.4.6"
+
+[[MKL_jll]]
+deps = ["Artifacts", "IntelOpenMP_jll", "JLLWrappers", "LazyArtifacts", "Libdl", "Pkg"]
+git-tree-sha1 = "c253236b0ed414624b083e6b72bfe891fbd2c7af"
+uuid = "856f044c-d86e-5d09-b602-aeab76dc8ba7"
+version = "2021.1.1+1"
+
 [[MacroTools]]
 deps = ["Markdown", "Random"]
 git-tree-sha1 = "6a8a2a625ab0dea913aba95c11370589e0239ff0"
@@ -526,6 +649,12 @@ git-tree-sha1 = "916b850daad0d46b8c71f65f719c49957e9513ed"
 uuid = "78c3b35d-d492-501b-9361-3d52fe80e533"
 version = "0.7.1"
 
+[[MonteCarloMeasurements]]
+deps = ["Distributed", "Distributions", "LinearAlgebra", "MacroTools", "Random", "RecipesBase", "Requires", "SLEEFPirates", "StaticArrays", "Statistics", "StatsBase", "Test"]
+git-tree-sha1 = "8d2dc50cef7583e7b27a0c66dc0a0b32eb4c1f52"
+uuid = "0987c9cc-fe09-11e8-30f0-b96dd679fdca"
+version = "0.10.1"
+
 [[MozillaCACerts_jll]]
 uuid = "14a3606d-f60d-562e-9121-12d972cd8159"
 
@@ -548,6 +677,12 @@ version = "0.3.0"
 [[NetworkOptions]]
 uuid = "ca575930-c2e3-43a9-ace4-1e988b2c1908"
 
+[[OffsetArrays]]
+deps = ["Adapt"]
+git-tree-sha1 = "b3dfef5f2be7d7eb0e782ba9146a5271ee426e90"
+uuid = "6fe1bfb0-de20-5000-8ca7-80f57d26f881"
+version = "1.6.2"
+
 [[Ogg_jll]]
 deps = ["Artifacts", "JLLWrappers", "Libdl", "Pkg"]
 git-tree-sha1 = "a42c0f138b9ebe8b58eba2271c5053773bde52d0"
@@ -589,6 +724,12 @@ git-tree-sha1 = "f82a0e71f222199de8e9eb9a09977bd0767d52a0"
 uuid = "90014a1f-27ba-587c-ab20-58faa44d9150"
 version = "0.11.0"
 
+[[Pandas]]
+deps = ["Compat", "DataValues", "IteratorInterfaceExtensions", "Lazy", "Pkg", "PyCall", "Statistics", "TableTraits", "TableTraitsUtils", "Test"]
+git-tree-sha1 = "40b84de2260989a63792704014b99a86bb8f1425"
+uuid = "eadc2687-ae89-51f9-a5d9-86b5a6373a9c"
+version = "1.4.0"
+
 [[Parsers]]
 deps = ["Dates"]
 git-tree-sha1 = "c8abc88faa3f7a3950832ac5d6e690881590d6dc"
@@ -644,6 +785,24 @@ version = "0.11.1"
 deps = ["Unicode"]
 uuid = "de0858da-6303-5e67-8744-51eddeeeb8d7"
 
+[[ProgressLogging]]
+deps = ["Logging", "SHA", "UUIDs"]
+git-tree-sha1 = "80d919dee55b9c50e8d9e2da5eeafff3fe58b539"
+uuid = "33c8b6b6-d38a-422a-b730-caa89a2f386c"
+version = "0.1.4"
+
+[[ProgressMeter]]
+deps = ["Distributed", "Printf"]
+git-tree-sha1 = "6e9c89cba09f6ef134b00e10625590746ba1e036"
+uuid = "92933f4c-e287-5a05-a399-4b506db050ca"
+version = "1.5.0"
+
+[[PyCall]]
+deps = ["Conda", "Dates", "Libdl", "LinearAlgebra", "MacroTools", "Serialization", "VersionParsing"]
+git-tree-sha1 = "dd1a970b543bd02efce2984582e996af28cab27f"
+uuid = "438e738f-606a-5dbb-bf0a-cddfbfd45ab0"
+version = "1.92.2"
+
 [[Qt5Base_jll]]
 deps = ["Artifacts", "CompilerSupportLibraries_jll", "Fontconfig_jll", "Glib_jll", "JLLWrappers", "Libdl", "Libglvnd_jll", "OpenSSL_jll", "Pkg", "Xorg_libXext_jll", "Xorg_libxcb_jll", "Xorg_xcb_util_image_jll", "Xorg_xcb_util_keysyms_jll", "Xorg_xcb_util_renderutil_jll", "Xorg_xcb_util_wm_jll", "Zlib_jll", "xkbcommon_jll"]
 git-tree-sha1 = "16626cfabbf7206d60d84f2bf4725af7b37d4a77"
@@ -670,6 +829,11 @@ git-tree-sha1 = "441e6fc35597524ada7f85e13df1f4e10137d16f"
 uuid = "e6cf234a-135c-5ec9-84dd-332b85af5143"
 version = "1.4.0"
 
+[[Ratios]]
+git-tree-sha1 = "37d210f612d70f3f7d57d488cb3b6eff56ad4e41"
+uuid = "c84ed2f1-dad5-54f0-aa8e-dbefe2724439"
+version = "0.4.0"
+
 [[RecipesBase]]
 git-tree-sha1 = "b3fb709f3c97bfc6e948be68beeecb55a0b340ae"
 uuid = "3cdcf5f2-1ef4-517c-9805-6587b60abb01"
@@ -713,6 +877,12 @@ version = "0.3.0+0"
 [[SHA]]
 uuid = "ea8e919c-243c-51af-8825-aaa63cd721ce"
 
+[[SLEEFPirates]]
+deps = ["IfElse", "Libdl", "VectorizationBase"]
+git-tree-sha1 = "3e682ce17a16c9dfb9d2fde0ceb2347e23faafba"
+uuid = "476501e8-09a2-5ece-8869-fb82de89a1fa"
+version = "0.6.15"
+
 [[Scratch]]
 deps = ["Dates"]
 git-tree-sha1 = "ad4b278adb62d185bbcb6864dc24959ab0627bf6"
@@ -829,6 +999,12 @@ git-tree-sha1 = "c06b2f539df1c6efa794486abfb6ed2022561a39"
 uuid = "3783bdb8-4a98-5b6b-af9a-565f29a5fe9c"
 version = "1.0.1"
 
+[[TableTraitsUtils]]
+deps = ["DataValues", "IteratorInterfaceExtensions", "Missings", "TableTraits"]
+git-tree-sha1 = "8fc12ae66deac83e44454e61b02c37b326493233"
+uuid = "382cd787-c1b6-5bf2-a167-d5b971a19bda"
+version = "1.0.1"
+
 [[Tables]]
 deps = ["DataAPI", "DataValueInterfaces", "IteratorInterfaceExtensions", "LinearAlgebra", "TableTraits", "Test"]
 git-tree-sha1 = "a9ff3dfec713c6677af435d6a6d65f9744feef67"
@@ -839,6 +1015,12 @@ version = "1.4.1"
 deps = ["ArgTools", "SHA"]
 uuid = "a4e569a6-e804-4fa4-b0f3-eef7a1d5b13e"
 
+[[TerminalLoggers]]
+deps = ["LeftChildRightSiblingTrees", "Logging", "Markdown", "Printf", "ProgressLogging", "UUIDs"]
+git-tree-sha1 = "e185a19bb9172f0cf5bc71233fab92a46f7ae154"
+uuid = "5d786b92-1e48-4d6f-9151-6b4477ca9bed"
+version = "0.1.3"
+
 [[Test]]
 deps = ["InteractiveUtils", "Logging", "Random", "Serialization"]
 uuid = "8dfed614-e22c-5e08-85e1-65c5234f0b40"
@@ -878,6 +1060,17 @@ version = "1.0.2"
 [[Unicode]]
 uuid = "4ec0a83e-493e-50e2-b9ac-8f72acf5a8f5"
 
+[[VectorizationBase]]
+deps = ["ArrayInterface", "Hwloc", "IfElse", "Libdl", "LinearAlgebra", "Static"]
+git-tree-sha1 = "ec513821175957ffb4a33af7d4b96065e3c0cdf6"
+uuid = "3d5dd08c-fd9d-11e8-17fa-ed2836048c2f"
+version = "0.19.27"
+
+[[VersionParsing]]
+git-tree-sha1 = "80229be1f670524750d905f8fc8148e5a8c4537f"
+uuid = "81def892-9a0e-5fdd-b105-ffc91e053289"
+version = "1.2.0"
+
 [[Wayland_jll]]
 deps = ["Artifacts", "Expat_jll", "JLLWrappers", "Libdl", "Libffi_jll", "Pkg", "XML2_jll"]
 git-tree-sha1 = "dc643a9b774da1c2781413fd7b6dcd2c56bb8056"
@@ -890,6 +1083,12 @@ git-tree-sha1 = "2839f1c1296940218e35df0bbb220f2a79686670"
 uuid = "2381bf8a-dfd0-557d-9999-79630e7b1b91"
 version = "1.18.0+4"
 
+[[WoodburyMatrices]]
+deps = ["LinearAlgebra", "SparseArrays"]
+git-tree-sha1 = "59e2ad8fd1591ea019a5259bd012d7aee15f995c"
+uuid = "efce3f68-66dc-5838-9240-27a6d6f5f9b6"
+version = "0.5.3"
+
 [[XML2_jll]]
 deps = ["Artifacts", "JLLWrappers", "Libdl", "Libiconv_jll", "Pkg", "Zlib_jll"]
 git-tree-sha1 = "afd2b541e8fd425cd3b7aa55932a257035ab4a70"

CovidAlertVaccinationModel/Project.toml

@@ -13,11 +13,15 @@ DelimitedFiles = "8bb1440f-4735-579b-a4ab-409b98df4dab"
 Distributions = "31c24e10-a181-5473-b8eb-7969acd0382f"
 ImportAll = "c65182e5-40f4-518f-8165-175b85689199"
 Intervals = "d8418881-c3e1-53bb-8760-2df7ec849ed5"
+KernelDensity = "5ab0869b-81aa-558d-bb23-cbf5423bbe9b"
+KissABC = "9c9dad79-530a-4643-a18b-2704674d4108"
+LaTeXStrings = "b964fa9f-0449-5b57-a5c2-d3ea65f4040f"
 LabelledArrays = "2ee39098-c373-598a-b85f-a56591580800"
 LightGraphs = "093fc24a-ae57-5d10-9952-331d41423f4d"
 LinearAlgebra = "37e2e46d-f89d-539d-b4ee-838fcccc9c8e"
 NamedTupleTools = "d9ec5142-1e00-5aa0-9d6a-321866360f50"
 NetworkLayout = "46757867-2c16-5918-afeb-47bfcb05e46a"
+Pandas = "eadc2687-ae89-51f9-a5d9-86b5a6373a9c"
 Pipe = "b98c9c47-44ae-5843-9183-064241ee97a0"
 Plots = "91a5bcdd-55d7-5caf-9e0b-520d859cae80"
 Random = "9a3f8284-a2c9-5f02-9a11-845980a1fd5c"